BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022H06LP1|AL427967
(966 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1706 1870 0.0
>3x_Contig1706
Length = 16303
Score = 1870 bits (938), Expect = 0.0
Identities = 956/966 (98%), Gaps = 1/966 (0%)
Strand = Plus / Minus
Query: 1 gatcaagtcttgtgcagctttgtgataggtgtttgttcattcataaagttcacttccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6768 gatcaagtcttgtgcagctttgtgataggtgtttgttcattcataaagttcacttccaaa 6709
Query: 61 gttttgaaagatggtggtgtttacgaggaggaagacttgaactgtaacgttatgagtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6708 gttttgaaagatggtggtgtttacgaggaggaagacttgaactgtaacgttatgagtttg 6649
Query: 121 gatatgctctctggcgtggacacaaaagaagtaatagatttattgaactcttcgttgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6648 gatatgctctctggcgtggacacaaaagaagtaatagatttattgaactcttcgttgcaa 6589
Query: 181 ctgttagttcagtcatactcagaatctacgcatctacaaaaacttgttgatttagtcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6588 ctgttagttcagtcatactcagaatctacgcatctacaaaaacttgttgatttagtcaaa 6529
Query: 241 catttgttgcacttacccaattatcattatccctcatgtcagtcttcggtttcttcagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6528 catttgttgcacttacccaattatcattatccctcatgtcagtcttcggtttcttcagac 6469
Query: 301 ttactacctttgcaaaaatcactagatattatttcttcattggtacaagacgattatact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6468 ttactacctttgcaaaaatcactagatattatttcttcattggtacaagacgattatact 6409
Query: 361 actaagcagcattcataccctcctggttgtttttccaagggcattcaaaagaggcgtgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6408 actaagcagcattcataccctcctggttgtttttccaagggcattcaaaagaggcgtgat 6349
Query: 421 aataacttcccaccaaaggatctctttgaacctaagggagacgaatatgtctcttatact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6348 aataacttcccaccaaaggatctctttgaacctaagggagacgaatatgtctcttatact 6289
Query: 481 gaattcatgagagatatcatagcggcattatcggtaaaagattgcaatacagcgttcgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6288 gaattcatgagagatatcatagcggcattatcggtaaaagattgcaatacagcgttcgaa 6229
Query: 541 atcagacaatatgtttggtttttcaaccgaattagacaaaggacagtyatggctcgtgcg 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 6228 atcagacaatatgtttggtttttcaaccgaattagacaaaggacagtcatggctcgtgcg 6169
Query: 601 tkactgcaatcatatttaattagagaagacaccatcttagacaagtttcggtttaacacg 660
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6168 ttactgcaatcatatttaattagagaagacaccatcttagacaagtttcggtttaacacg 6109
Query: 661 ttcaaggatatgcacctttacgagttctcattagcaggaacagcattgtacgatgtaata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6108 ttcaaggatatgcacctttacgagttctcattagcaggaacagcattgtacgatgtaata 6049
Query: 721 tccagccgcgagcvaacaacagatcgcgataatatgatagaagccttgaatgaactctca 780
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6048 tccagccgcgagcaaacaacagatcgcgataatatgatagaagccttgaatgaactctca 5989
Query: 781 tattgcctccttcgtttggkatcaaaatatgccacaaaattcatgtwggcatcggcaagg 840
|||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||
Sbjct: 5988 tattgcctccttcg-ttggtatcaaaatatgccacaaaattcatgtaggcatcggcaagg 5930
Query: 841 atttaatagactattactcgactgggactccgttcaagcgcaatttkagcmatatgaaac 900
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 5929 atttaatagactattactcgactgggactccgttcaagcgcaatttgagcaatatgaaac 5870
Query: 901 ccaatggcaatcaatgggaattgtagatagcattwcaaacatggggaatatcccatttat 960
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 5869 ccaatggcaatcaatgggaattgtagatagcattacaaacatggggaatatcccattgat 5810
Query: 961 gccagt 966
||||||
Sbjct: 5809 gccagt 5804
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6434
Number of Sequences: 1807
Number of extensions: 6434
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 966
length of database: 10,358,551
effective HSP length: 16
effective length of query: 950
effective length of database: 10,329,639
effective search space: 9813157050
effective search space used: 9813157050
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)